VTK  9.0.1
vtkMNITagPointReader.h
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1 /*=========================================================================
2 
3  Program: Visualization Toolkit
4  Module: vtkMNITagPointReader.h
5 
6  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
7  All rights reserved.
8  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
9 
10  This software is distributed WITHOUT ANY WARRANTY; without even
11  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
12  PURPOSE. See the above copyright notice for more information.
13 
14 =========================================================================*/
15 /*=========================================================================
16 
17 Copyright (c) 2006 Atamai, Inc.
18 
19 Use, modification and redistribution of the software, in source or
20 binary forms, are permitted provided that the following terms and
21 conditions are met:
22 
23 1) Redistribution of the source code, in verbatim or modified
24  form, must retain the above copyright notice, this license,
25  the following disclaimer, and any notices that refer to this
26  license and/or the following disclaimer.
27 
28 2) Redistribution in binary form must include the above copyright
29  notice, a copy of this license and the following disclaimer
30  in the documentation or with other materials provided with the
31  distribution.
32 
33 3) Modified copies of the source code must be clearly marked as such,
34  and must not be misrepresented as verbatim copies of the source code.
35 
36 THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE SOFTWARE "AS IS"
37 WITHOUT EXPRESSED OR IMPLIED WARRANTY INCLUDING, BUT NOT LIMITED TO,
38 THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
39 PURPOSE. IN NO EVENT SHALL ANY COPYRIGHT HOLDER OR OTHER PARTY WHO MAY
40 MODIFY AND/OR REDISTRIBUTE THE SOFTWARE UNDER THE TERMS OF THIS LICENSE
41 BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL OR CONSEQUENTIAL DAMAGES
42 (INCLUDING, BUT NOT LIMITED TO, LOSS OF DATA OR DATA BECOMING INACCURATE
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44 THE USE OR INABILITY TO USE THE SOFTWARE, EVEN IF ADVISED OF THE
45 POSSIBILITY OF SUCH DAMAGES.
46 
47 =========================================================================*/
65 #ifndef vtkMNITagPointReader_h
66 #define vtkMNITagPointReader_h
67 
68 #include "vtkIOMINCModule.h" // For export macro
69 #include "vtkPolyDataAlgorithm.h"
70 #include "vtkStdString.h" // needed for std::string
71 
72 class vtkPolyData;
73 class vtkPoints;
74 class vtkStringArray;
75 class vtkDoubleArray;
76 class vtkIntArray;
77 
78 class VTKIOMINC_EXPORT vtkMNITagPointReader : public vtkPolyDataAlgorithm
79 {
80 public:
82 
83  static vtkMNITagPointReader* New();
84  void PrintSelf(ostream& os, vtkIndent indent) override;
85 
87 
90  vtkSetStringMacro(FileName);
91  vtkGetStringMacro(FileName);
93 
97  virtual const char* GetFileExtensions() { return ".tag"; }
98 
102  virtual const char* GetDescriptiveName() { return "MNI tags"; }
103 
107  virtual int CanReadFile(const char* name);
108 
115  virtual int GetNumberOfVolumes();
116 
122  virtual vtkPoints* GetPoints(int port);
123  virtual vtkPoints* GetPoints() { return this->GetPoints(0); }
124 
130  virtual vtkStringArray* GetLabelText();
131 
137  virtual vtkDoubleArray* GetWeights();
138 
144  virtual vtkIntArray* GetStructureIds();
145 
151  virtual vtkIntArray* GetPatientIds();
152 
156  virtual const char* GetComments();
157 
158 protected:
160  ~vtkMNITagPointReader() override;
161 
162  char* FileName;
164 
166  char* Comments;
167 
168  int ReadLine(istream& infile, std::string& linetext, std::string::iterator& pos);
169  int ReadLineAfterComments(istream& infile, std::string& linetext, std::string::iterator& pos);
170  int SkipWhitespace(istream& infile, std::string& linetext, std::string::iterator& pos, int nl);
171  int ParseLeftHandSide(
172  istream& infile, std::string& linetext, std::string::iterator& pos, std::string& identifier);
173  int ParseStringValue(
174  istream& infile, std::string& linetext, std::string::iterator& pos, std::string& data);
175  int ParseIntValues(
176  istream& infile, std::string& linetext, std::string::iterator& pos, int* values, int count);
177  int ParseFloatValues(
178  istream& infile, std::string& linetext, std::string::iterator& pos, double* values, int count);
179 
180  virtual int ReadFile(vtkPolyData* output1, vtkPolyData* output2);
181 
182  int RequestData(
183  vtkInformation* request, vtkInformationVector** inInfo, vtkInformationVector* outInfo) override;
184 
185 private:
187  void operator=(const vtkMNITagPointReader&) = delete;
188 };
189 
190 #endif
vtkPoints
represent and manipulate 3D points
Definition: vtkPoints.h:33
vtkStdString.h
vtkMNITagPointReader::GetFileExtensions
virtual const char * GetFileExtensions()
Get the extension for this file format.
Definition: vtkMNITagPointReader.h:97
vtkMNITagPointReader::LineNumber
int LineNumber
Definition: vtkMNITagPointReader.h:165
vtkX3D::data
@ data
Definition: vtkX3D.h:321
vtkInformationVector
Store zero or more vtkInformation instances.
Definition: vtkInformationVector.h:35
vtkPolyDataAlgorithm::PrintSelf
void PrintSelf(ostream &os, vtkIndent indent) override
Methods invoked by print to print information about the object including superclasses.
vtkPolyDataAlgorithm.h
vtkX3D::port
@ port
Definition: vtkX3D.h:453
vtkPolyDataAlgorithm::RequestData
virtual int RequestData(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
This is called by the superclass.
vtkIndent
a simple class to control print indentation
Definition: vtkIndent.h:33
vtkIntArray
dynamic, self-adjusting array of int
Definition: vtkIntArray.h:39
vtkMNITagPointReader::GetDescriptiveName
virtual const char * GetDescriptiveName()
Get the name of this file format.
Definition: vtkMNITagPointReader.h:102
vtkMNITagPointReader::GetPoints
virtual vtkPoints * GetPoints()
Definition: vtkMNITagPointReader.h:123
vtkX3D::name
@ name
Definition: vtkX3D.h:225
vtkInformation
Store vtkAlgorithm input/output information.
Definition: vtkInformation.h:73
vtkX3D::string
@ string
Definition: vtkX3D.h:496
vtkMNITagPointReader
A reader for MNI tag files.
Definition: vtkMNITagPointReader.h:78
vtkMNITagPointReader::FileName
char * FileName
Definition: vtkMNITagPointReader.h:162
vtkPolyData
concrete dataset represents vertices, lines, polygons, and triangle strips
Definition: vtkPolyData.h:84
vtkStringArray
a vtkAbstractArray subclass for strings
Definition: vtkStringArray.h:36
vtkDoubleArray
dynamic, self-adjusting array of double
Definition: vtkDoubleArray.h:35
vtkMNITagPointReader::NumberOfVolumes
int NumberOfVolumes
Definition: vtkMNITagPointReader.h:163
vtkMNITagPointReader::Comments
char * Comments
Definition: vtkMNITagPointReader.h:166
vtkPolyDataAlgorithm::New
static vtkPolyDataAlgorithm * New()
vtkPolyDataAlgorithm
Superclass for algorithms that produce only polydata as output.
Definition: vtkPolyDataAlgorithm.h:41